Statistics - iRefWeb - Wodak Lab

DatabaseRelease DateRelease Label
bind 2013 Nov 28
bind_translation 2013 Nov 28
biogrid 2013 Nov 01
corum 2009 Dec 02
dip 2014 Mar 31
hprd 2014 Mar 31
innatedb 2013 Nov 25
intact 2013 Nov 21
matrixdb 2012 Aug 03
mpact 2013 Nov 28
mpidb 2013 Nov 28
mppi 2013 Nov 28
ophid 2013 Nov 28
physical or genetic interactions
physical interactions only
unique annotations grouped/stacked with non-unique annotations
unique annotations as separate bars from non-unique annotations
log scale.
A "unique" annotation means only one database recorded it.

Interactions

Proteins/Genes

PubMeds

Show annotations involving physical or genetic interactions
Show annotations involving physical interactions only.

Interactions

Proteins/Genes

PubMeds

Hover your mouse over cells to highlight the details of the overlap.
Annotation Overlap Counts
Annotation Overlap Percent (cell count as percentage of that row's database total annotations)

Interactions

bind bind_translation biogrid corum dip hprd innatedb intact matrixdb mpact mpidb mppi ophid
bind 60,720
100%
50,840
84%
31,359
52%
309
<1%
30,030
49%
3,488
6%
221
<1%
32,898
54%
4
<1%
6,278
10%
56
<1%
436
<1%
2,900
5%
bind_translation 50,840
86%
58,991
100%
34,396
58%
279
<1%
30,340
51%
4,921
8%
335
<1%
34,203
58%
6
<1%
6,263
11%
51
<1%
444
<1%
3,876
7%
biogrid 31,359
11%
34,396
12%
286,327
100%
362
<1%
38,498
13%
22,080
8%
1,666
<1%
78,271
27%
19
<1%
4,113
1%
3
<1%
287
<1%
16,403
6%
corum 309
12%
279
11%
362
14%
2,607
100%
157
6%
508
19%
30
1%
370
14%
0
0%
0
0%
0
0%
14
<1%
240
9%
dip 30,030
42%
30,340
42%
38,498
53%
157
<1%
72,248
100%
1,232
2%
234
<1%
34,526
48%
4
<1%
6,635
9%
221
<1%
54
<1%
1,228
2%
hprd 3,488
9%
4,921
12%
22,080
54%
508
1%
1,232
3%
40,515
100%
1,045
3%
12,000
30%
32
<1%
0
0%
0
0%
265
<1%
17,657
44%
innatedb 221
4%
335
6%
1,666
30%
30
<1%
234
4%
1,045
19%
5,495
100%
698
13%
3
<1%
0
0%
0
0%
18
<1%
684
12%
intact 32,898
17%
34,203
17%
78,271
39%
370
<1%
34,526
17%
12,000
6%
698
<1%
198,460
100%
17
<1%
6,661
3%
452
<1%
159
<1%
10,109
5%
matrixdb 4
2%
6
3%
19
8%
0
0%
4
2%
32
14%
3
1%
17
7%
228
100%
0
0%
0
0%
1
<1%
25
11%
mpact 6,278
49%
6,263
49%
4,113
32%
0
0%
6,635
52%
0
0%
0
0%
6,661
52%
0
0%
12,875
100%
0
0%
0
0%
0
0%
mpidb 56
5%
51
4%
3
<1%
0
0%
221
19%
0
0%
0
0%
452
38%
0
0%
0
0%
1,179
100%
0
0%
0
0%
mppi 436
57%
444
58%
287
38%
14
2%
54
7%
265
35%
18
2%
159
21%
1
<1%
0
0%
0
0%
764
100%
182
24%
ophid 2,900
6%
3,876
8%
16,403
35%
240
<1%
1,228
3%
17,657
37%
684
1%
10,109
21%
25
<1%
0
0%
0
0%
182
<1%
47,432
100%

Proteins

bind bind_translation biogrid corum dip hprd innatedb intact matrixdb mpact mpidb mppi ophid
bind 33,235
100%
26,979
81%
19,496
59%
2,235
7%
17,080
51%
3,453
10%
1,252
4%
21,200
64%
82
<1%
4,279
13%
234
<1%
692
2%
3,409
10%
bind_translation 26,979
91%
29,688
100%
19,793
67%
2,239
8%
16,607
56%
3,758
13%
1,367
5%
20,781
70%
95
<1%
3,918
13%
134
<1%
680
2%
3,650
12%
biogrid 19,496
39%
19,793
40%
49,493
100%
3,539
7%
17,580
36%
9,117
18%
2,382
5%
36,136
73%
130
<1%
4,394
9%
29
<1%
668
1%
8,559
17%
corum 2,235
51%
2,239
51%
3,539
81%
4,357
100%
1,603
37%
2,272
52%
787
18%
3,619
83%
43
<1%
0
0%
0
0%
382
9%
2,250
52%
dip 17,080
70%
16,607
68%
17,580
72%
1,603
7%
24,346
100%
2,390
10%
1,049
4%
20,706
85%
53
<1%
4,502
18%
459
2%
392
2%
2,366
10%
hprd 3,453
35%
3,758
38%
9,117
93%
2,272
23%
2,390
24%
9,825
100%
1,698
17%
8,280
84%
112
1%
0
0%
0
0%
394
4%
7,558
77%
innatedb 1,252
44%
1,367
48%
2,382
84%
787
28%
1,049
37%
1,698
60%
2,820
100%
2,263
80%
54
2%
0
0%
0
0%
224
8%
1,655
59%
intact 21,200
34%
20,781
34%
36,136
58%
3,619
6%
20,706
33%
8,280
13%
2,263
4%
61,993
100%
133
<1%
4,817
8%
857
1%
679
1%
7,919
13%
matrixdb 82
46%
95
54%
130
73%
43
24%
53
30%
112
63%
54
31%
133
75%
177
100%
0
0%
0
0%
12
7%
109
62%
mpact 4,279
88%
3,918
81%
4,394
91%
0
0%
4,502
93%
0
0%
0
0%
4,817
99%
0
0%
4,847
100%
0
0%
0
0%
1
<1%
mpidb 234
18%
134
10%
29
2%
0
0%
459
35%
0
0%
0
0%
857
66%
0
0%
0
0%
1,308
100%
0
0%
0
0%
mppi 692
87%
680
86%
668
84%
382
48%
392
49%
394
50%
224
28%
679
86%
12
2%
0
0%
0
0%
794
100%
406
51%
ophid 3,409
36%
3,650
39%
8,559
91%
2,250
24%
2,366
25%
7,558
80%
1,655
18%
7,919
84%
109
1%
1
<1%
0
0%
406
4%
9,448
100%

PubMeds

bind bind_translation biogrid corum dip hprd innatedb intact matrixdb mpact mpidb mppi ophid
bind 15,014
100%
10,270
68%
3,444
23%
499
3%
941
6%
2,859
19%
139
<1%
1,637
11%
0
0%
543
4%
39
<1%
324
2%
546
4%
bind_translation 10,270
89%
11,508
100%
3,325
29%
474
4%
840
7%
2,647
23%
152
1%
1,447
13%
1
<1%
531
5%
37
<1%
281
2%
521
5%
biogrid 3,444
10%
3,325
10%
34,247
100%
899
3%
1,950
6%
11,482
34%
929
3%
4,691
14%
7
<1%
574
2%
1
<1%
178
<1%
3,589
10%
corum 499
28%
474
27%
899
51%
1,756
100%
33
2%
924
53%
66
4%
238
14%
0
0%
2
<1%
0
0%
14
<1%
266
15%
dip 941
15%
840
14%
1,950
32%
33
<1%
6,116
100%
382
6%
62
1%
425
7%
0
0%
494
8%
127
2%
5
<1%
117
2%
hprd 2,859
14%
2,647
13%
11,482
56%
924
5%
382
2%
20,446
100%
703
3%
3,077
15%
18
<1%
12
<1%
0
0%
221
1%
4,721
23%
innatedb 139
5%
152
6%
929
35%
66
3%
62
2%
703
27%
2,619
100%
198
8%
0
0%
0
0%
0
0%
4
<1%
198
8%
intact 1,637
14%
1,447
12%
4,691
39%
238
2%
425
4%
3,077
26%
198
2%
12,051
100%
1
<1%
110
<1%
220
2%
39
<1%
672
6%
matrixdb 0
0%
1
1%
7
8%
0
0%
0
0%
18
22%
0
0%
1
1%
83
100%
0
0%
0
0%
0
0%
8
10%
mpact 543
57%
531
56%
574
61%
2
<1%
494
52%
12
1%
0
0%
110
12%
0
0%
946
100%
0
0%
0
0%
4
<1%
mpidb 39
4%
37
4%
1
<1%
0
0%
127
14%
0
0%
0
0%
220
23%
0
0%
0
0%
937
100%
0
0%
0
0%
mppi 324
100%
281
86%
178
55%
14
4%
5
2%
221
68%
4
1%
39
12%
0
0%
0
0%
0
0%
325
100%
69
21%
ophid 546
11%
521
11%
3,589
74%
266
6%
117
2%
4,721
98%
198
4%
672
14%
8
<1%
4
<1%
0
0%
69
1%
4,820
100%
Log Scale
Arabidopsis thaliana
Oryza sativa
Caenorhabditis elegans
Drosophila melanogaster
Homo sapiens
Bos taurus
Mus musculus
Rattus norvegicus
Saccharomyces cerevisiae S288c
iRefWeb 13.0
In collaboration with Ian Donaldson — using iRefIndex Version 13.0
Watch a short video tutorial on how to use iRefWeb here.