Statistics - iRefWeb - Wodak Lab


In most cases we are counting interactions, not source database records.


Click on the columns or bars of the charts for additional information.

* Excludes predicted interactions (OPHID), genetic interactions and interactions with no supporting PubMed IDs (where these characteristics can be identified).

Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

Summary of Unique Contributions

Total interactions and proteins unique to each database.

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Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

Summary of Organism Contributions

Total interactions and proteins for the major organisms complied by individual databases.

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Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

Database Statistics

Distributions of PubMeds, interactions, and proteins, across databases by organism. Select the organisms of interest to you for examination.

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BIND
BIOGRID
DIP
INTACT
MINT
HPRD
MPACT
MPPI
CORUM
ALL DBS
** Note: Because every interaction is unique in iRefIndex/iRefWeb, the total number of interactions for "ALL DBS" is also the unique number of interactions for "ALL DBS"; with individual source databases, not all of their interactions are necessarily unique to them as more than one database may have annotated the same interaction.
Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

Overlap Statistics

Overlaps of PubMeds, interactions, and proteins, across databases by organism. Select the organisms of interest to you for examination.

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Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

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Distribution of PubMeds, interactions, and proteins across major organisms.

PubMeds
Interactions
Proteins

Click a column title below to sort table values.

Unique Contribs Organism Contribs Database Stats Overlap Stats Organism Stats iRefIndex Stats Top of Page

iRefIndex Statistics

Details of the current iRefIndex release being used by iRefWeb.

database release date release version total records published total records parsed and loaded total interactions found
BIND 2005 May 25 bind_05/05/25 193,648 81,587 62,453
BIOGRID 2009 Sep 07 Version 2.0.53 0 237,796 163,023
CORUM 2008 Sep 08 CORUM_08/09/08 2,104 2,104 1,919
DIP 2009 Jan 06 dip_09/01/06 57,675 56,613 56,353
HPRD 2009 Jul 06 Release 8 40,075 40,075 39,952
INTACT 2009 Jul 19 intact_09/07/19 133,302 132,076 113,483
MINT 2009 Jul 28 mint_09/07/28 110,788 109,639 77,736
MPACT 2008 Jan 10 MPACT_08/01/10 16,504 16,286 13,321
MPPI 2004 Jan 06 MPPI_04/01/06 1,814 1,690 827
OPHID 2006 Jul 18 ophid_06/07/18 73,257 73,160 47,462