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Protein/Gene IDs and Aliases

LEFT:
Enter your protein/gene IDs and aliases below, or you can paste in a whole list, to find interactions that match any of them. Autocomplete begins after 3 characters.

RIGHT (optional):
If you wish, constrain your search to find interactions between any protein/gene in the left box with any entered or pasted in the right box.

Lists of genes or proteins aliases and PubMed IDs should be delimited by whitespace or new lines.

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MI (MINT Inspired) scores are in the range [0,1], are limited to interactions where all its proteins are the same species, supported by valid PubMed IDs, not predicted or from OPHID, not a self-interaction, and are from one of the following organisms:

A. thaliana
B. taurus
C. elegans
D. melanogaster
H. sapiens

M. musculus
O. sativa
R. norvegicus
S. cerevisiae
S. pombe

Any interaction that does not meet the above requirements has no score calculated and this is displayed as 'n/c'

Go here to find out how the score is calculated.

* Filter counts for interaction method and type propagate to their parent terms as defined by the PSI-MI ontology.
Thus a selected method or type filter will return all of its child terms as well.
** Organism filter counts (for instance yeast and its subspecies) do not propagate.

Interacting Proteins	Interaction ID	Distinct Proteins	MI Score	MI Percentile	Supporting PubMeds
Homo sapiens Mus musculus Other Drosophila melanogaster Caenorhabditis elegans Saccharomyces cerevisiae S288c	Click an ID to view the details of an interaction.	Min 1.00 Max 1198.00 Mean 2.25 σ 3.58	Min 0.09 Max 1.00 Mean 0.49 σ 0.26	Min 0.00 Max 0.00 Mean 0.00 σ 0.00	Min 1.00 Max 282.00 Mean 1.34 σ 1.47
Possible Complex	792765	93	0.64	68	1
Possible Complex	1008819	93	0.89	81	1
Possible Complex	1210357	93	0.64	68	1
Possible Complex	1596822	93	0.28	33	1
Possible Complex	1729046	93	0.86	78	1
Possible Complex	869729	94	n/c	n/c	1
Possible Complex	1693153	95	n/c	n/c	1
Possible Complex	1698166	96	0.86	78	1
Possible Complex	1698258	98	n/c	n/c	1
Possible Complex	637510	99	0.77	75	1
Possible Complex	1399772	99	0.79	76	1
Possible Complex	1561042	99	n/c	n/c	1
Possible Complex	1735730	99	0.43	48	1
Possible Complex	1053385	102	n/c	n/c	1
Possible Complex	1380669	102	0.86	79	1
Possible Complex	1742897	102	0.49	62	1
Possible Complex	1419733	103	0.70	71	1
Possible Complex	1142043	104	0.88	86	1
Possible Complex	825567	105	n/c	n/c	1
Possible Complex	1562035	105	0.64	64	1

There will be a long pause (30-60 seconds or more depending on the number of records) and then your download will begin. If you have many results (>50k) there will be pauses during the download as your search results come in 50k batches, so a large search result may take a while to completely download.

You can choose between three formats for your download:

iRef Interaction IDs – for use in OrthoNets.
MITAB – a tab delimited file format agreed upon by the PSI-MI working group (look here for details).
MINI-TAB – a 'minified' version of the MITAB file with only 5 columns:
- iRef Interaction ID
- primary alias A
- primary alias B
- A iRef ID
- B iRef ID

Fetching your alias match(es)...

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