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Protein/Gene IDs and Aliases

LEFT:
Enter your protein/gene IDs and aliases below, or you can paste in a whole list, to find interactions that match any of them. Autocomplete begins after 3 characters.

RIGHT (optional):
If you wish, constrain your search to find interactions between any protein/gene in the left box with any entered or pasted in the right box.

Lists of genes or proteins aliases and PubMed IDs should be delimited by whitespace or new lines.

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MI (MINT Inspired) scores are in the range [0,1], are limited to interactions where all its proteins are the same species, supported by valid PubMed IDs, not predicted or from OPHID, not a self-interaction, and are from one of the following organisms:

A. thaliana
B. taurus
C. elegans
D. melanogaster
H. sapiens

M. musculus
O. sativa
R. norvegicus
S. cerevisiae
S. pombe

Any interaction that does not meet the above requirements has no score calculated and this is displayed as 'n/c'

Go here to find out how the score is calculated.

* Filter counts for interaction method and type propagate to their parent terms as defined by the PSI-MI ontology.
Thus a selected method or type filter will return all of its child terms as well.
** Organism filter counts (for instance yeast and its subspecies) do not propagate.

Interacting Proteins	Interaction ID	Distinct Proteins	MI Score	MI Percentile	Supporting PubMeds
Homo sapiens Mus musculus Other Drosophila melanogaster Caenorhabditis elegans Saccharomyces cerevisiae S288c	Click an ID to view the details of an interaction.	Min 1.00 Max 1198.00 Mean 2.25 σ 3.58	Min 0.09 Max 1.00 Mean 0.49 σ 0.26	Min 0.00 Max 0.00 Mean 0.00 σ 0.00	Min 1.00 Max 282.00 Mean 1.34 σ 1.47
Possible Complex	1722155	1198	n/c	n/c	1
Possible Complex	1721939	608	0.43	48	1
Possible Complex	1698402	401	n/c	n/c	1
Possible Complex	774887	381	0.54	57	1
Possible Complex	684687	360	0.49	56	1
Possible Complex	1714991	317	0.43	51	1
Possible Complex	1692565	306	n/c	n/c	1
Possible Complex	1055834	270	0.43	51	1
Possible Complex	1615415	252	n/c	n/c	1
Possible Complex	1737982	226	n/c	n/c	1
Possible Complex	1697486	223	n/c	n/c	1
Possible Complex	1599973	221	n/c	n/c	1
Possible Complex	1611274	216	0.55	68	1
Possible Complex	1743117	214	n/c	n/c	1
Possible Complex	1728421	206	0.68	75	1
Possible Complex	777143	192	n/c	n/c	1
Possible Complex	1691037	185	0.64	68	1
Possible Complex	1491467	183	0.74	79	1
Possible Complex	1550814	183	0.55	68	1
Possible Complex	1724177	179	n/c	n/c	1

There will be a long pause (30-60 seconds or more depending on the number of records) and then your download will begin. If you have many results (>50k) there will be pauses during the download as your search results come in 50k batches, so a large search result may take a while to completely download.

You can choose between three formats for your download:

iRef Interaction IDs – for use in OrthoNets.
MITAB – a tab delimited file format agreed upon by the PSI-MI working group (look here for details).
MINI-TAB – a 'minified' version of the MITAB file with only 5 columns:
- iRef Interaction ID
- primary alias A
- primary alias B
- A iRef ID
- B iRef ID

Fetching your alias match(es)...

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